Publications

2018
Trimetaphosphate Activates Prebiotic Peptide Synthesis across a Wide Range of Temperature and pH
I Sibilska, Y Feng, L Li, J Yin
Origins of Life and Evolution of Biospheres 48 (3), 277-287

Kinetic modeling of virus growth in cells
J Yin, J Redovich
Microbiol. Mol. Biol. Rev. 82 (2), e00066-17

2017
Effects of Trimetaphosphate on abiotic formation and hydrolysis of peptides
I Sibilska, B Chen, L Li, J Yin
Life 7 (4), 50

Inhibition of infection spread by co-transmitted defective interfering particles
A Baltes, F Akpinar, B Inankur, J Yin
PloS one 12 (9), e0184029

Quantitative profiling of innate immune activation by viral infection in single cells
AC Timm, JW Warrick, J Yin
Integrative Biology 9 (9), 782-791

Image-Based Identification of Cell Cultures by Machine Learning
O Babatunde, A Baltes, J Yin

Differential disruption of nucleocytoplasmic trafficking pathways by rhinovirus 2A proteases
K Watters, B Inankur, JC Gardiner, J Warrick, NM Sherer, J Yin, …
Journal of virology 91 (8), e02472-16

Evolvix BEST Names for semantic reproducibility across code2brain interfaces
L Loewe, KS Scheuer, SA Keel, V Vyas, B Liblit, B Hanlon, MC Ferris, …
Annals of the New York Academy of Sciences 1387 (1), 124-144

2016
Rapid induction and persistence of paracrine-induced cellular antiviral states arrest viral infection spread in A549 cells
EA Voigt, A Swick, J Yin
Virology 496, 59-66

Spatial-temporal patterns of viral amplification and interference initiated by a single infected cell
F Akpinar, B Inankur, J Yin
Journal of virology 90 (16), 7552-7566

Temperature gradients drive radial fluid flow in Petri dishes and multiwell plates
SM Lindsay, J Yin
AIChE Journal 62 (6), 2227-2233

Neucode labels for multiplexed, absolute protein quantification
GK Potts, EA Voigt, DJ Bailey, CM Rose, MS Westphall, AS Hebert, J Yin, …
Analytical chemistry 88 (6), 3295-3303

High-throughput single-cell kinetics of virus infections in the presence of defective interfering particles
F Akpinar, A Timm, J Yin
Journal of virology 90 (3), 1599-1612

Tools for single-cell kinetic analysis of virus-host interactions
JW Warrick, A Timm, A Swick, J Yin
PloS one 11 (1), e0145081

2015
Kinetic differences and synergistic antiviral effects between type I and type III interferon signaling indicate pathway independence
EA Voigt, J Yin
Journal of Interferon & Cytokine Research 35 (9), 734-747

Robust kinetics of an RNA virus: Transcription rates are set by genome levels
C Timm, A Gupta, J Yin
Biotechnology and bioengineering 112 (8), 1655-1662

Sterol carrier protein 2, a critical host factor for dengue virus infection, alters the cholesterol distribution in mosquito Aag2 cells
Q Fu, B Inankur, J Yin, R Striker, Q Lan
Journal of medical entomology 52 (5), 1124-1134

Characterization of vesicular stomatitis virus populations by tunable resistive pulse sensing
F Akpinar, J Yin
Journal of virological methods 218, 71-76

Genome rearrangement affects RNA virus adaptability on prostate cancer cells
K Pesko, EA Voigt, A Swick, VJ Morley, C Timm, J Yin, PE Turner
Frontiers in genetics 6, 121

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